BookCold Spring Harbor Laboratory.
Contents:
Symposium participants
Foreword
Gene control. Imaging transcription: past, present and future / Robert A. Coleman, Zhe Liu, Xavier Darzacq, Robert Tijan, Robert H. Singer, and Timothée Lionnet
Visualizing the HoxD gene cluster at the nanoscale level / Pierre J. Fabre, Alexander Benke, Suliana Manley, and Denis Duboule
Transcriptional enhancers: bridging the genome and phenome / Bing Ren and Feng Yue
Regulatory principles governing tissue specificity of developmental enhancers / Emma K. Farley, Katrina M. Olson, and Michael S. Levine
The importance of controlling transcription elongation at coding and noncoding RNA loci / Benjamin S. Scruggs and Karen Adelman
Chromatin domains and nuclear position. Regulatory domains and their mechanisms / Nezha S. Benabdallah and Wendy A. Bickmore
Large-scale chromatin structure-function relationships during the cell cycle and development: insights from replication timing / Vishnu Dileep, Juan Carlos Rivera-Mulia, Jiao Sima, and David M. Gilbert
Prenucleosomes and active chromatin / Mai T. Khuong, Jia Fei, Haruhiko Ishii, and James T. Kadonaga
HIPMap: a high-throughput imaging method for mapping spatial gene positions / Sigal Schachar, Gianluca, Pegoraro, and Tom Misteli
Genome organization and chromosome architecture / Giorgio Bernardi
Genome stability. A system to study aneuploidy in vivo / Sarah J. Pfau and Angelika Amon
Resolution of recombination intermediates: mechanisms and regulation / Stephen C. West, Miguel G. Blanco, Ying Wait Chan, Joao Matos, Shriparna Sarbajna, and Haley D.M. Wyatt
21st century genetics: mass spectrometry of yeast telomerase / Kah Wai Lin and Virginia A. Zakian
From mutational mechanisms in single cells to mutational patterns in cancer genomes / Cheng-Zhong Zhang and David Pellman
The evolution of tumors in mice and humans with germline p53 mutations / Arnold J. Levine, Chang S. Chan, Crissy Dudgeon, Anna Puzio-Kuter, and Pierre Hainaut
Germ cells and early development. Mechanism and reconstitution in vitro of germ cell development in mammals / Kazuki Kurimoto and Mitinori Saitou
Erase-maintain-establish: natural reprogramming of the mammalian epigenome / Milena Leseva, Barbara B. Knowles, Daniel M. Messerschmidt, and Davor Solter
Regulation of reprogramming and cellular plasticity through histone exchange and histone variant incorporation / Xavier Gaume and Maria-Elena Torres-Padilla
ZFP57 and the targeted maintenance of postfertilization genomic imprints / Nozomi Takahashi, Dionne Gray, Ruslan Strogantsev, Angela Noon, Celia Delahaye, William C. Skarnes, Peri H. Tate, and Anne C. Ferguson-Smith
Embryonic stem cells and development. Biological networks governing the acquisition, maintenance and dissolution of pluripotency: insights from functional genomics approaches / Kevin Andrew Uy Gonzales and Huck-Hui Ng
Monitoring dynamics of DNA methylation at single-cell resolution during development and disease / Yonatan Stelzer and Rudolf Jaenisch
Perturbing chromatin structure to understand mechanisms of gene expression / Caroline R. Bartman and Gerd A. Blobel
Mechanisms underlying the selection and function of macrophage-specific enhancers / Verena M. Link, David Gosselin, and Christopher K. Glass
Metabolism and signaling. Clock-talk: interactions between central and peripheral circadian oscillators in mammals / Ueli Schibler, Ivana Gotic, Camille Saini, Pascal Gos, Thomas Curie, Yann Emmenegger, Flore Sinturel, Pauline Gosselin, Alan Gerber, Fabienne Fleury-Olela, Gianpaolo Rando, Maud Demarque, and Paul Franken
Dissecting the rev-erba cistrome and the mechanisms controlling circadian transcription in liver / Bin Fang and Mitchell A. Lazar
Modulating the genomic programming of adipocytes / Anne Loft, Søren Fisker Schmidt, and Susanne Mandrup
Targeting transcriptional and epigenetic reprogramming in stromal cells in fibrosis and cancer / Nasun Hah, Mara H. Sherman, Ruth T. Yu, Michael Downes, and Ronald M. Evans
Regulation of RORyt in inflammatory lymphoid cell differentiation / Wendy Huang and Dan R. Littman
Evolution. How transcription networks evolve and produce biological novelty / Isabel Nocedal and Alexander D. Johnson
The African turquoise killifish: a model for exploring vertebrate aging and diseases in the fast lane / Itamar Harel and Anne Brunet
Transposable elements, polydactyl proteins, and the genesis of human-specific transcription networks / Didier Trono
Dorcas Cummings lecture. Svante Pääbo
Conversations at the symposium. Geneviève Almouzni
Angelika Amon
Julius Brennecke
Emmanuelle Charpentier
Job Dekker
Titia de Lange
Jennifer Doudna
Denis Duboule
Ron Evans
Anne Ferguson-Smith
Edith Heard
David Kingsley
Arnold Levine
Susan Lindquist
Dan Littman
Richard Morimoto
David Page
Wolf Reik
Bing Ren
Ueli Schibler
Davor Solter
Alexander Tarakhovsky
Joanna Wysocka
Rick Young
Author index
Subject index.