Bookedited by Daniel Martins-de-Souza, Laboratory of Neuroprotemics, Department of Biochemistry,
... Show More Institute of Biology, State University of the Campinas (UNICAMP), Campinas, Brazil, Max Planck Institute of Psychiatry, Munich, Germany, Research Group of Proteomics, Department of Psychiatry and Psychotherapy, Ludwig-Maximilians-University of Munich, Munich, Germany, Laboratory of Neurosciences (LIM-27), Institute of Psychiatry, University of Sao Paulo, Sao Paulo, Brazil.
Contents:
Survey of shotgun proteomics / Fabio Cesar Sousa Nogueira and Gilberto B. Domont
LC-MALDI-TOF/TOF for shotgun proteomics / Patricia Fernández-Puente ... [et al.]
Fully automatable multidimensional reversed-phase liquid chromatography with online tandem mass spectrometry / Maggie P.Y. Lam ... [et al.]
GeLC-MS/MS analysis of complex protein mixtures / Monika Dzieciatkowska, Ryan Hill, and Kirk C. Hansen
IPG strip-based peptide fractionation for shotgun proteomics / Murat Eravci, Christian Sommer, and Matthias Selbach
SILAC yeast : from labeling to comprehensive Proteome Quantification / Lyris M. F. de Godoy
Analysis of proteome dynamics in mice by isotopic labeling / John C. Price and Sina Ghaemmaghami
Stable isotope labeling in mammals (SILAM) / Daniel B. McClatchy and John R. Yates III
Analysis of individual protein turnover in live animals on a proteome-wide scale / Stefan Reckow and Christian Webhofer
Determining protein subcellular localization in mammalian cell culture with biochemical fractionation and iTRAQ 8-plex quantification / Andy Christoforou, Alfonso Martinez Arias, and Kathryn S. Lilley
Brain quantitative proteomics combining GeLC-MS and isotope-coded protein labeling (ICPL) / Giuseppina Maccarrone, Maria Lebar, and Daniel Martins-de-Souza
Employing TMT quantification in a shotgun-MS platform / Darragh P. O'Brien and John F. Timms
Employing TMT quantification in shotgun-MS proteomic analysis : a focus on skeletal muscle / Bruno Menezes de Oliveira
Spectral counting label-free proteomics / Liisa Arike and Lauri Peil
Quantification of proteins by label-free LC-MSE / Alon Savidor and Yishai Levin
Bioinformatics for proteomics : opportunities at the interface between the scientists, their experiments, and the community / Marc Vaudel ... [et al.]
Identification of DNA damage checkpoint-dependent protein interactions in Saccharomyces cerevisiae using quantitative mass spectrometry / Francisco M. Bastos de Oliveira and Marcus B. Smolka
Application of shotgun proteomics for discovery-driven protein-protein interaction / Livia Goto-Silva ... [et al.]
Mapping protein complexes using covalently linked antibodies and isobaric mass tags / Antje Dittmann ... [et al.]
Biomarker verification using selected reaction monitoring and shotgun proteomics / Angel Mauricio Castro-Gamero, Clarice Izumi, and José César Rosa
Use of universal stable isotope labeling by amino acids in cell culture (SILAC)-based selected reaction monitoring (SRM) approach for verification of breast cancer-related protein markers / Ning Qing Liu ... [et al.]
Secretome analysis by high-throughput proteomics and multiple reaction monitoring (MRM) / Vitor M. Faça ... [et al.]
Preparation of heteroelement-incorporated and stable isotope-labeled protein standards for quantitative proteomics / Anna Konopka ... [et al.]
One-source peptide/phosphopeptide ratio standards for accurate and site-specific determination of the degree of phosphorylation / Martin E. Boehm, Bettina Hahn, and Wolf D. Lehmann
Quantitative glycoproteomics for N-glycoproteome profiling / Sheng Pan
Practical recipe to survey phosphoproteomes / William C. Edelman ... [et al.]
Quantitation of the phosphoproteome using the library-assisted eXtracted ion chromatogram (LAXIC) strategy / Justine V. Arrington, Liang Xue, and W. Andy Tao
Fast, efficient, and quality-controlled phosphopeptide enrichment from minute sample amounts using titanium dioxide / Clarissa Dickhut, Sonja Radau, and René P. Zahedi
Quantifying small molecule-induced changes in cellular protein expression and posttranslational modifications using isobaric mass tags / Isabelle Becher, Maria Fälth Savitski, and Marcus Bantscheff
Analysis of protein structure by cross-linking combined with mass spectrometry / Evgeniy V. Petrotchenko ... [et al.]
Top-down proteomics by means of orbitrap mass spectrometry / Kai Scheffler.