Bookedited by Jesus V. Jorrin-Novo, Setsuko Komatsu, Wolfram Weckwerth and Stefanie WienKoop.
Contents:
Plant Proteomics Methods and Protocols
From Proteomics to Systems Biology: MAPA, MASS WESTERN, PROMEX and COVAIN as a User-Oriented Platform
Plant Proteomics: From Genome Sequencing to Proteome Databases and Repositories
How to Use 2D Gel Electrophoresis in Plant Proteomics
Standarization of Data Processing and Statistical Analysis in a 2-DE-Based Comparative Plant Proteomics Experiment
The Expanding Universe of Mass Analyzer Configurations for Biological Analysis
A Protocol for Protein Extraction from Lipid-Rich Plant Tissues Suitable for Electrophoresis
Making a Protein Extract in Plant Pathogenic Fungi for Gel- and LC-Based Proteomics
Plant Proteomics Methods to Reach Low-Abundance Proteins
Combination of 2DE and LC for Plant Proteomics Analysis
2DE Analysis of Forest Tree Proteins Using Fluorescent Labels and Multiplexing
Differential Plant Proteome Analysis by Isobaric Tags for Relative and Absolute Quantitation (iTRAQ)
Global Quantitative Proteomics Using Spectral Counting: An Inexpensive Experimental and Bioinformatics Workflow for Deep Proteome Coverage
Combining Chymotrypsin/trypsin Digestion to Identify Hydrophobic Proteins from Oil Bodies
Mass Western for Absolute Quantification of Target Proteins and Considerations About the Instrument of Choice
Selected Reaction Monitoring Mass Spectrometry: A Methodology Overview
Mass Spectrometry Based Imaging of Metabolites and Proteins
Using the Yeast Two-Hybrid System to Identify Protein-Protein Interactions
Modifications of Wheat Germ Cell-Free System for Functional Proteomics of Plant Membrane Proteins
Arabidopsis Proteomics: A Simple and Standardizable Workflow for Quantitative Proteome Characterization
Analysis of Rice Proteins Using SDS-PAGE Shotgun Proteomics
Medicago truncatula Proteomics for Systems Biology: Novel Rapid Shotgun LC-MS Approach for Relative Quantification Based on Full-Scan Selective Peptide Extraxtion (Selpex)
Soybean Proteomics
Proteome Analysis of Orphan Plant Species, Fact or Fiction?
An Improved Detergent-Compatible Gel-Fractionation LC-LTQ-Orbitrap-MS Workflow for Plant and Microbial Proteomics
Seed Proteomics
Back to Osborne. Sequential Protein Extraction and LC-MS for Characterization of the Seed Proteome
Xylem Sap Proteomics
Suspension Cultured-Plant Cells as a Tool to Analyze the Extracellular Proteome
Pollen Cultivation and Preparation for Proteome Studies
Isolation of the Plant Cytosolic Fraction for Proteomic Analysis
Quantitative Proteomic Analysis of Intact Plastids
Shotgun Proteomics of Plant Plasma Membrane and Microdomain Proteins Using Nano-LC-MS/MS
Plant Mitochondrial Proteomics
Separation of the Plant Golgi Apparatus and Endoplasmic Reticulum by Free-Flow Electrophoresis
Isolation of Leaf Peroxisomes from Arabidopsis for Organelle Proteomics Analyses
Proteomics of Field Samples, the Case of the Chernobyl Area
Differential Proteome and Secretome Analysis During Rice-Pathogen Interaction
Protein Extraction and Gel-Based Separation Methods to Analyse Responses to Pathogens in Carnation (Dianthus caryophyllus L)
StageTip-Based HAMMOC, an Efficient and Inexpensive Phosphopeptide Enrichment Method for Plant Shotgun Phosphoproteomics
Simultaneous Identification and Quantification of Nitrosylation Sites by Combination of Biotin Switch and ICAT Labeling
Tandem Metal-Oxide Affinity Chromatography for Enhanced Depth of Phosphoproteome Analysis
N-Glycoprotein Enrichment by Lectin Affinity Chromatography
Rapid and High-Throughput N-glycomic Analysis of Plant Glycoproteins
Assay for Proteasome-Dependent Protein Degradation and Ubiquitinated Proteins
Separation of Membrane Protein Complexes by Native LDS-PAGE
Identification of Thioredoxin Target Disulfides Using Isotope-Coded Affinity Tags
Class III Peroxidases
Proteotyping of Holm oak (Quercus ilex subsp. ballota) Provenances Through Proteomic Analysis of Acorn Flour
Immunoproteomics Analysis of Food Allergens
Beer and Wort Proteomics
Precipitation of Champagne Base Wine Proteins Prior 2D Electrophoresis
The Minimal Information About a Proteomics Experiment (MIAPE) from the Proteomics Standards Initiative.