- [developed by] Department of Genetics, School of Medicine, Stanford University.Stores and organizes highly curated data for the yeast Candida albicans.
- Detsky, Allan S.
- Goldman, L.
- The Catalogue of somatic mutations In cancer (COSMIC) is a specialized database that stores data about somatic mutations related to human cancers.
- Integrated software environment for pharmacophore modeling and three-dimensional modeling, with applications for rational drug design.
- The Class Architecture Topology and Homologous superfamily protein structure classification (CATH) is one of the main databases providing hierarchical classification of protein domain structures. It clusters proteins at four major levels: Class(C), Architecture(A), Topology(T) and Homologous superfamily (H).
- A system for studying the the classification of protein sequences and investigate their evolutionary relationships based on protein domains; includes a suite of analysis methods to visualize the structure of domains and align new domains against exist sequences.
- Package of molecular modeling and simulations programs, with applications in rational drug design and structure-based drug design.
- Database SciFinder Web, Users must registerRequired Registration Portal SciFinder WebAlso available: Print – v. 1, pt. 1-3 , 1907.
- An integrated tool for tiling array, ChIP-seq, genome and cis-regulatory element analysis.
- The Oligo program is likely the best tool for creating oligonucleotides ("oligos"), i.e., determining the sequence of oligos so that they can be synthesized and used in e.g., polymerase chain reaction (PCR).
- The Collaborative Drug Discovery (CDD) database is a system that enables scientists to archive, mine, and collaborate around pre-clinical chemical and biological drug discovery data using a web-based interface.
- A popular DNA motif finder applicable to finding candidates for regulatory factor binding sites by searching for statistically overrepresented motifs. It enumerates all motifs in the search space and is guaranteed to produce those motifs with greatest z-scores
- Charlson, M. E.
- Altman, Russ B.; Batzoglou, Serafim; Liu, X. S.; Liu, Yueyi Irene; Wei, Liping.Gibbs sampling search tool biased to search in promoter regions that are conserved across species to identify motifs for transcription factors.
- Institute for Genomic Research.The Comprehensive microbial resource (CMR) is a repository of data covering all microbial genomes whose genome has been sequenced to completion.
- Elber, Ron; Scheraga, Harold Abraham.
- Brutlag, Douglas L.
- A module of Vector NTI for generating and analyzing biomolecular sequence contigs.
- Ibelgaufts, Horst.
- Database that presents search results as a graphic network that describes relationships discovered through text-mining. Relationship networks cluster important terms and act as a navigational tool. This approach is used to show relationships between a wide range of biomedical terms, including Medical Subject Heading, Gene Ontology, Pharmaceutical, Herbal medicine and Chemical as well as Gene and Protein terms.
- Barnas, Gary; Hu, Charles; Kneusel, Ron.Predicts the risk of heart disease within 10 years. The results are applicable only for the ages of 30 to 74. Risk factors include: sex, age, smoker, diabetes, blood pressure, and cholesterol.
- Bhagwat, Medha.
- Cockcroft, Donald W.; Gault, M. H.
- Fagan, Terry.
- 2006Andy Budd ; with Cameron Moll and Simon Collison.Status: Not Checked OutLane Catalog Record
- Downloadable spreadsheet that "enables health care providers and patients to estimate 10-year and lifetime risks for atherosclerotic cardiovascular disease (ASCVD), defined as coronary death or nonfatal myocardial infarction, or fatal or nonfatal stroke."
- Visualization, modeling and analysis tool for molecular and genetic interaction networks.
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Over 10,000 notes outline the status of specific infections within each country.