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Recent Stanford Publications in PubMed

  1. Chemically modified guide RNAs enhance CRISPR-Cas genome editing in human primary cells.
    Hendel A, Bak RO, Clark JT, Kennedy AB, Ryan DE, Roy S, Steinfeld I, Lunstad BD, Kaiser RJ, Wilkens AB, Bacchetta R, Tsalenko A, Dellinger D, Bruhn L, Porteus MH
    Nat Biotechnol
  2. Nuclear pore complex remodeling by p75(NTR) cleavage controls TGF-β signaling and astrocyte functions.
    Schachtrup C, Ryu JK, Mammadzada K, Khan AS, Carlton PM, Perez A, Christian F, Le Moan N, Vagena E, Baeza-Raja B, Rafalski V, Chan JP, Nitschke R, Houslay MD, Ellisman MH, Wyss-Coray T, Palop JJ, Akassoglou K
    Nat Neurosci
  3. Transvenous Approach to Intracranial Arteriovenous Malformations: Challenging the Axioms of Arteriovenous Malformation Therapy?
    Choudhri O, Ivan M, Lawton MT
  4. Tapping Underserved Students to Reshape the Biomedical Workforce.
    Winkleby MA, Ned J, Crump C
    J Community Med Health Educ
  5. An expedient synthesis of maraviroc (UK-427,857) via C-H functionalization.
    Bedell TA, Hone GA, Bois JD, Sorensen EJ
    Tetrahedron Lett
  6. RNA Binding Protein Nanos2 Organizes Post-transcriptional Buffering System to Retain Primitive State of Mouse Spermatogonial Stem Cells.
    Zhou Z, Shirakawa T, Ohbo K, Sada A, Wu Q, Hasegawa K, Saba R, Saga Y
    Dev Cell
  7. Epidural spinal involvement of Erdheim-Chester disease causing myelopathy.
    Hwang BY, Liu A, Kern J, Goodwin CR, Wolinsky JP, Desai A
    J Clin Neurosci
  8. The anatomical and functional specialization of the fusiform gyrus.
    Weiner KS, Zilles K
  9. SPD-2/CEP192 and CDK Are Limiting for Microtubule-Organizing Center Function at the Centrosome.
    Yang R, Feldman JL
    Curr Biol
  10. Suppression of PGC-1α Is Critical for Reprogramming Oxidative Metabolism in Renal Cell Carcinoma.
    LaGory EL, Wu C, Taniguchi CM, Ding CC, Chi JT, von Eyben R, Scott DA, Richardson AD, Giaccia AJ
    Cell Rep
  11. The Nuclear PolyA-Binding Protein Nab2p Is Essential for mRNA Production.
    Schmid M, Olszewski P, Pelechano V, Gupta I, Steinmetz LM, Jensen TH
    Cell Rep
  12. Many Private Mutations Originate From The First Few Divisions Of A Human Colorectal Adenoma.
    Kang H, Salomon MP, Sottoriva A, Zhao J, Toy M, Press MF, Curtis C, Marjoram P, Siegmund K, Shibata D
    J Pathol
  13. Classification models for subthreshold generalized anxiety disorder in a college population: Implications for prevention.
    Kanuri N, Taylor CB, Cohen JM, Newman MG
    J Anxiety Disord
  14. Improving thermal dose accuracy in magnetic resonance-guided focused ultrasound surgery: Long-term thermometry using a prior baseline as a reference.
    Bitton RR, Webb TD, Pauly KB, Ghanouni P
    J Magn Reson Imaging
  15. Utilization and likelihood of radiologic diagnostic imaging in patients with implantable cardiac defibrillators.
    Nazarian S, Reynolds MR, Ryan MP, Wolff SD, Mollenkopf SA, Turakhia MP
    J Magn Reson Imaging
  16. Metabolome progression during early gut microbial colonization of gnotobiotic mice.
    Marcobal A, Yusufaly T, Higginbottom S, Snyder M, Sonnenburg JL, Mias GI
    Sci Rep
  17. Transcriptome sequencing reveals both neutral and adaptive genome dynamics in a marine invader.
    Tepolt CK, Palumbi SR
    Mol Ecol
  18. Body mass index changes in youth in the first year after type 1 diabetes diagnosis.
    Gregg B, Connor CG, Ruedy KJ, Beck RW, Kollman C, Schatz D, Cengiz E, Harris B, Tamborlane WV, Klingensmith GJ, Lee JM, Pediatric Diabetes Consortium
    J Pediatr
  19. Single mammalian cells compensate for differences in cellular volume and DNA copy number through independent global transcriptional mechanisms.
    Padovan-Merhar O, Nair GP, Biaesch AG, Mayer A, Scarfone S, Foley SW, Wu AR, Churchman LS, Singh A, Raj A
    Mol Cell
  20. Diverse coupling of neurons to populations in sensory cortex.
    Okun M, Steinmetz NA, Cossell L, Iacaruso MF, Ko H, Barthó P, Moore T, Hofer SB, Mrsic-Flogel TD, Carandini M, Harris KD
  21. Balance between cell-substrate adhesion and myosin contraction determines the frequency of motility initiation in fish keratocytes.
    Barnhart E, Lee KC, Allen GM, Theriot JA, Mogilner A
    Proc Natl Acad Sci U S A
  22. Reperfusion of very low cerebral blood volume lesion predicts parenchymal hematoma after endovascular therapy.
    Mishra NK, Christensen S, Wouters A, Campbell BC, Straka M, Mlynash M, Kemp S, Cereda CW, Bammer R, Marks MP, Albers GW, Lansberg MG, DEFUSE 2 Investigators
  23. Selective Inhibitors of Cyclin G Associated Kinase (GAK) as Anti-Hepatitis C Agents.
    Kovackova S, Chang L, Bekerman E, Neveu G, Barouch-Bentov R, Chaikuad A, Heroven C, Šála M, De Jonghe S, Knapp S, Einav S, Herdewijn P
    J Med Chem
  24. Hypoxic induction of AKAP12 variant 2 shifts PKA-mediated protein phosphorylation to enhance migration and metastasis of melanoma cells.
    Finger EC, Castellini L, Rankin EB, Vilalta M, Krieg AJ, Jiang D, Banh A, Zundel W, Powell MB, Giaccia AJ
    Proc Natl Acad Sci U S A
  25. Digoxin use in patients with atrial fibrillation and adverse cardiovascular outcomes: a retrospective analysis of the Rivaroxaban Once Daily Oral Direct Factor Xa Inhibition Compared with Vitamin K Antagonism for Prevention of Stroke and Embolism Trial in Atrial Fibrillation (ROCKET AF).
    Washam JB, Stevens SR, Lokhnygina Y, Halperin JL, Breithardt G, Singer DE, Mahaffey KW, Hankey GJ, Berkowitz SD, Nessel CC, Fox KA, Califf RM, Piccini JP, Patel MR, ROCKET AF Steering Committee and Investigators
  26. The genetic and mechanistic basis for variation in gene regulation.
    Pai AA, Pritchard JK, Gilad Y
    PLoS Genet
  27. The global regulatory architecture of transcription during the Caulobacter cell cycle.
    Zhou B, Schrader JM, Kalogeraki VS, Abeliuk E, Dinh CB, Pham JQ, Cui ZZ, Dill DL, McAdams HH, Shapiro L
    PLoS Genet
  28. Longitudinal assessment of neuroanatomical and cognitive differences in young children with type 1 diabetes: association with hyperglycemia.
    Mauras N, Mazaika P, Buckingham B, Weinzimer S, White NH, Tsalikian E, Hershey T, Cato A, Cheng P, Kollman C, Beck RW, Ruedy K, Aye T, Fox L, Arbelaez AM, Wilson D, Tansey M, Tamborlane W, Peng D, Marzelli M, Winer KK, Reiss AL, Diabetes Research in Children Network (DirecNet)
  29. Increased risk of cancer in infertile men: analysis of U.S. claims data.
    Eisenberg ML, Li S, Brooks JD, Cullen MR, Baker LC
    J Urol
  30. Genetic polymorphisms in ESR1 and ESR2 genes, and risk of hypospadias in a multiethnic study population.
    Choudhry S, Baskin LS, Lammer EJ, Witte JS, Dasgupta S, Ma C, Surampalli A, Shen J, Shaw GM, Carmichael SL
    J Urol
  31. The IPD and IMGT/HLA database: allele variant databases.
    Robinson J, Halliwell JA, Hayhurst JD, Flicek P, Parham P, Marsh SG
    Nucleic Acids Res
  32. HIV diversity and drug resistance from plasma and non-plasma analytes in a large treatment programme in western Kenya.
    Kantor R, DeLong A, Balamane M, Schreier L, Lloyd RM, Injera W, Kamle L, Mambo F, Muyonga S, Katzenstein D, Hogan J, Buziba N, Diero L
    J Int AIDS Soc
  33. Measurement of mast cell surface molecules by high-throughput immunophenotyping using transcription (HIT).
    Haddon DJ, Jarrell JA, Hughes MR, Snyder K, McNagny KM, Kattah MG, Utz PJ
    Methods Mol Biol
  34. FcεRI expression and dynamics on mast cells.
    Rios EJ, Kalesnikoff J
    Methods Mol Biol
  35. Substrate selection for fundamental studies of electrocatalysts and photoelectrodes: inert potential windows in acidic, neutral, and basic electrolyte.
    Benck JD, Pinaud BA, Gorlin Y, Jaramillo TF
    PLoS One
  36. Not as good as you think? Trait positive emotion is associated with increased self-reported empathy but decreased empathic performance.
    Devlin HC, Zaki J, Ong DC, Gruber J
    PLoS One
  37. Transcriptome-wide mapping of pseudouridines: pseudouridine synthases modify specific mRNAs in S. cerevisiae.
    Lovejoy AF, Riordan DP, Brown PO
    PLoS One
  38. Cutaneous ulceration in dermatomyositis: association with anti-melanoma differentiation-associated gene 5 antibodies and interstitial lung disease.
    Narang NS, Casciola-Rosen L, Li S, Chung L, Fiorentino DF
    Arthritis Care Res (Hoboken)
  39. The complex portal--an encyclopaedia of macromolecular complexes.
    Meldal BH, Forner-Martinez O, Costanzo MC, Dana J, Demeter J, Dumousseau M, Dwight SS, Gaulton A, Licata L, Melidoni AN, Ricard-Blum S, Roechert B, Skyzypek MS, Tiwari M, Velankar S, Wong ED, Hermjakob H, Orchard S
    Nucleic Acids Res
  40. Relationship of clinical course of illness variables to medical comorbidities in 900 adult outpatients with bipolar disorder.
    Post RM, Altshuler L, Leverich GS, Frye MA, Suppes T, McElroy SL, Keck PE, Nolen WA, Kupka RW, Grunze H, Rowe M
    Compr Psychiatry
  41. Millisecond flashes of light phase delay the human circadian clock during sleep.
    Zeitzer JM, Fisicaro RA, Ruby NF, Heller HC
    J Biol Rhythms
  42. Design, synthesis and pharmacological evaluation of 2-(thiazol-2-amino)-4-arylaminopyrimidines as potent anaplastic lymphoma kinase (ALK) inhibitors.
    Liu Z, Yue X, Song Z, Peng X, Guo J, Ji Y, Cheng Z, Ding J, Ai J, Geng M, Zhang A
    Eur J Med Chem
  43. The teaching practices inventory: a new tool for characterizing college and university teaching in mathematics and science.
    Wieman C, Gilbert S
    CBE Life Sci Educ
  44. Using an unconventional perfusion pattern in ear replantation-arterialization of the venous system.
    Momeni A, Parrett BM, Kuri M
  45. Early vein reconstruction and right-to-left dissection for left-sided pancreatic tumors with portal vein occlusion.
    Cloyd JM, Dua MM, Visser BC
    J Gastrointest Surg
  46. Assessing the health of the U.S. west coast with a regional-scale application of the Ocean Health Index.
    Halpern BS, Longo C, Scarborough C, Hardy D, Best BD, Doney SC, Katona SK, McLeod KL, Rosenberg AA, Samhouri JF
    PLoS One
  47. Foldscope: origami-based paper microscope.
    Cybulski JS, Clements J, Prakash M
    PLoS One
  48. Reply: 99mTc-MAA-based dosimetry for liver cancer treated using 90Y-loaded microspheres: known proof of effectiveness.
    Lam MG, Sze DY
    J Nucl Med
  49. Differences in neural circuitry guiding behavioral responses to polarized light presented to either the dorsal or ventral retina in Drosophila.
    Velez MM, Gohl D, Clandinin TR, Wernet MF
    J Neurogenet
  50. Tuberculosis treatment discontinuation and symptom persistence: an observational study of Bihar, India's public care system covering >100,000,000 inhabitants.
    Babiarz KS, Suen SC, Goldhaber-Fiebert JD
    BMC Public Health
  51. Ontology for the asexual development and anatomy of the colonial chordate Botryllus schlosseri.
    Manni L, Gasparini F, Hotta K, Ishizuka KJ, Ricci L, Tiozzo S, Voskoboynik A, Dauga D
    PLoS One
  52. Sedative and analgesic use on night and day shifts in a pediatric cardiovascular intensive care unit.
    Staveski SL, Tesoro TM, Cisco MJ, Roth SJ, Shin AY
    AACN Adv Crit Care
  53. Calculation of rate spectra from noisy time series data.
    Voelz VA, Pande VS