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6:00am - 8:00am Saturday morning 1/31/15

Recent Stanford Publications in PubMed

  1. Modeling stochastic noise in gene regulatory systems.
    Meister A, Du C, Li YH, Wong WH
    Quant Biol
  2. A time-indexed reference standard of adverse drug reactions.
    Harpaz R, Odgers D, Gaskin G, DuMouchel W, Winnenburg R, Bodenreider O, Ripple A, Szarfman A, Sorbello A, Horvitz E, White RW, Shah NH
    Sci Data
  3. Function through bio-inspired, synthesis-informed design: step-economical syntheses of designed kinase inhibitors†Dedicated to Max Malacria, a friend and scholar whose science and creative contributions to step-economical synthesis have inspired us all and moved the field closer to the ideal.‡Electronic supplementary information (ESI) available: Synthetic procedures and spectral data. See DOI: 10.1039/c4qo00228hClick here for additional data file.
    Wender PA, Axtman AD, Golden JE, Kee JM, Sirois LE, Quiroz RV, Stevens MC
    Org Chem Front
  4. A Modified Retromaxillary Approach to the Infratemporal Fossa: Three Case Studies.
    Woodford R, Chaudhary N, Wolf A, Lownie S, Armstrong JE
    J Oral Maxillofac Surg
  5. Diagnosis and management of acute kidney injury in patients with cirrhosis: revised consensus recommendations of the International Club of Ascites.
    Angeli P, Gines P, Wong F, Bernardi M, Boyer TD, Gerbes A, Moreau R, Jalan R, Sarin SK, Piano S, Moore K, Lee SS, Durand F, Salerno F, Caraceni P, Kim WR, Arroyo V, Garcia-Tsao G
  6. In vitro antifungal susceptibility of coelomycete agents of black grain eumycetoma to eight antifungals.
    Ahmed SA, de Hoog GS, Stevens DA, Fahal AH, van de Sande WW
    Med Mycol
  7. Genomics: CRISPR engineering turns on genes.
    Cho SW, Chang HY
  8. (13)C NMR detects conformational change in the 100-kD membrane transporter ClC-ec1.
    Abraham SJ, Cheng RC, Chew TA, Khantwal CM, Liu CW, Gong S, Nakamoto RK, Maduke M
    J Biomol NMR
  9. The ER membrane J protein C18 executes a distinct role in promoting SV40 membrane penetration.
    Bagchi P, Walczak CP, Tsai B
    J Virol
  10. A recurrent regulatory change underlying altered expression and Wnt response of the stickleback armor plates gene EDA.
    O'Brown NM, Summers BR, Jones FC, Brady SD, Kingsley DM
  11. Alzheimer's pantoum.
    Stanford E
    Am J Nurs
  12. Multi-cellular interactions sustain long-term contractility of human pluripotent stem cell-derived cardiomyocytes.
    Burridge PW, Metzler SA, Nakayama KH, Abilez OJ, Simmons CS, Bruce MA, Matsuura Y, Kim P, Wu JC, Butte M, Huang NF, Yang PC
    Am J Transl Res
  13. Cancer Cell Gene Expression Modulated from Plasma Membrane Integrin αvβ3 by Thyroid Hormone and Nanoparticulate Tetrac.
    Davis PJ, Glinsky GV, Lin HY, Leith JT, Hercbergs A, Tang HY, Ashur-Fabian O, Incerpi S, Mousa SA
    Front Endocrinol (Lausanne)
  14. Transient global amnesia associated with a unilateral infarction of the fornix: case report and review of the literature.
    Gupta M, Kantor MA, Tung CE, Zhang N, Albers GW
    Front Neurol
  15. Diagnostic Yield of Extended Cardiac Patch Monitoring in Patients with Stroke or TIA.
    Tung CE, Su D, Turakhia MP, Lansberg MG
    Front Neurol
  16. The brain, amphotericin B, and p-glycoprotein.
    Stevens DA, Clemons KV, Martinez M, Chen V
    Antimicrob Agents Chemother
  17. Multiscale Analyses of the Bone-implant Interface.
    Cha JY, Pereira MD, Smith AA, Houschyar KS, Yin X, Mouraret S, Brunski JB, Helms JA
    J Dent Res
  18. Novel codon-optimized mini-intronic plasmid for efficient, inexpensive, and xeno-free induction of pluripotency.
    Diecke S, Lu J, Lee J, Termglinchan V, Kooreman NG, Burridge PW, Ebert AD, Churko JM, Sharma A, Kay MA, Wu JC
    Sci Rep
  19. Long-range ion-water and ion-ion interactions in aqueous solutions.
    Chen C, Huang C, Waluyo I, Weiss T, Pettersson LG, Nilsson A
    Phys Chem Chem Phys
  20. More hippocrates, less hypocrisy: eliminate sugar-sweetened beverages from residency lunches.
    Nagata JM, Chamberlain LJ, Robinson TN
    Acad Med
  21. Menopausal symptoms in women with chronic kidney disease.
    Cheung KL, Stefanick ML, Allison MA, LeBlanc ES, Vitolins MZ, Shara N, Chertow GM, Winkelmayer WC, Tamura MK
  22. Dewetting and deposition of thin films with insoluble surfactants from curved silicone hydrogel substrates.
    Bhamla MS, Balemans C, Fuller GG
    J Colloid Interface Sci
  23. Using iPSCs and genomics to catch CNVs in the act.
    Urban AE, Purmann C
    Nat Genet
  24. Impact of surgical innovation on tissue repair in the surgical patient.
    Tevlin R, Atashroo D, Duscher D, Mc Ardle A, Gurtner GC, Wan DC, Longaker MT
    Br J Surg
  25. Reply: Studies in Fat Grafting: Part I. Effects of Injection Technique on In Vitro Fat Viability and In Vivo Volume Retention; and Studies in Fat Grafting: Part II. Effects of Injection Mechanics on Material Properties of Fat.
    Wan DC, Gurtner GC, Longaker MT
    Plast Reconstr Surg
  26. Exercise induces stromal cell-derived factor-1α-mediated release of endothelial progenitor cells with increased vasculogenic function.
    Chang E, Paterno J, Duscher D, Maan ZN, Chen JS, Januszyk M, Rodrigues M, Rennert RC, Bishop S, Whitmore AJ, Whittam AJ, Longaker MT, Gurtner GC
    Plast Reconstr Surg
  27. Microchip ELISA Coupled with Cell Phone to Detect Ovarian Cancer HE4 Biomarker in Urine.
    Wang S, Akbas R, Demirci U
    Methods Mol Biol
  28. OPTN/SRTR 2013 Annual Data Report: Liver.
    Kim WR, Lake JR, Smith JM, Skeans MA, Schladt DP, Edwards EB, Harper AM, Wainright JL, Snyder JJ, Israni AK, Kasiske BL
    Am J Transplant
  29. Causes and timing of death in extremely premature infants from 2000 through 2011.
    Patel RM, Kandefer S, Walsh MC, Bell EF, Carlo WA, Laptook AR, Sánchez PJ, Shankaran S, Van Meurs KP, Ball MB, Hale EC, Newman NS, Das A, Higgins RD, Stoll BJ, Eunice Kennedy Shriver National Institute of Child Health and Human Development Neonatal Research Network
    N Engl J Med
  30. Posttraumatic stress disorder and risk of spontaneous preterm birth.
    Shaw JG, Asch SM, Kimerling R, Frayne SM, Shaw KA, Phibbs CS
    Obstet Gynecol
  31. Pregnancy outcomes in the super obese, stratified by weight gain above and below institute of medicine guidelines.
    Swank ML, Marshall NE, Caughey AB, Main EK, Gilbert WM, Melsop KA, Chung JH
    Obstet Gynecol
  32. Commentary: Operational Definition of Epilepsy survey.
    Fisher RS
  33. Inner retinal preservation in rat models of retinal degeneration implanted with subretinal photovoltaic arrays.
    Light JG, Fransen JW, Adekunle AN, Adkins A, Pangeni G, Loudin J, Mathieson K, Palanker DV, McCall MA, Pardue MT
    Exp Eye Res
  34. Cross-kingdom chemical communication drives a heritable, mutually beneficial prion-based transformation of metabolism.
    Jarosz DF, Brown JC, Walker GA, Datta MS, Ung WL, Lancaster AK, Rotem A, Chang A, Newby GA, Weitz DA, Bisson LF, Lindquist S
  35. An evolutionarily conserved prion-like element converts wild fungi from metabolic specialists to generalists.
    Jarosz DF, Lancaster AK, Brown JC, Lindquist S
  36. Robust expansion of dendritic cells in vivo by hydrodynamic FLT3L-FC gene transfer.
    Tu H, Burke TM, Oderup C, Huang K, Wong K, Lewén S, LaJevic M, Zabel BA
    J Immunol Methods
  37. Oral 9-cis retinoid for childhood blindness due to Leber congenital amaurosis caused by RPE65 or LRAT mutations: an open-label phase 1b trial.
    Koenekoop RK, Sui R, Sallum J, van den Born LI, Ajlan R, Khan A, den Hollander AI, Cremers FP, Mendola JD, Bittner AK, Dagnelie G, Schuchard RA, Saperstein DA
  38. Cryoprecipitate therapy.
    Nascimento B, Goodnough LT, Levy JH
    Br J Anaesth
  39. Five strategies to effectively use online resources in emergency medicine.
    Thoma B, Joshi N, Trueger NS, Chan TM, Lin M
    Ann Emerg Med
  40. Risk of selected structural abnormalities in infants after increased nuchal translucency measurement.
    Baer RJ, Norton ME, Shaw GM, Flessel MC, Goldman S, Currier RJ, Jelliffe-Pawlowski LL
    Am J Obstet Gynecol
  41. Nanocones to study initial steps of endocytosis.
    Jeong S, Galic M
    Methods Mol Biol
  42. Anti-asialo GM1 NK cell depleting antibody does not alter the development of bleomycin induced pulmonary fibrosis.
    Monnier J, Zabel BA
    PLoS One
  43. Age-dependent transcriptome and proteome following transection of neonatal spinal cord of Monodelphis domestica (South American grey short-tailed opossum).
    Saunders NR, Noor NM, Dziegielewska KM, Wheaton BJ, Liddelow SA, Steer DL, Ek CJ, Habgood MD, Wakefield MJ, Lindsay H, Truettner J, Miller RD, Smith AI, Dietrich WD
    PLoS One
  44. Human stem cells for modeling heart disease and for drug discovery.
    Matsa E, Burridge PW, Wu JC
    Sci Transl Med
  45. As the egg turns: monitoring egg attendance behavior in wild birds using novel data logging technology.
    Shaffer SA, Clatterbuck CA, Kelsey EC, Naiman AD, Young LC, VanderWerf EA, Warzybok P, Bradley R, Jahncke J, Bower GC
    PLoS One
  46. Insulin resistance: regression and clustering.
    Yoon S, Assimes TL, Quertermous T, Hsiao CF, Chuang LM, Hwu CM, Rajaratnam B, Olshen RA
    PLoS One
  47. Functional genomics with a comprehensive library of transposon mutants for the sulfate-reducing bacterium Desulfovibrio alaskensis G20.
    Kuehl JV, Price MN, Ray J, Wetmore KM, Esquivel Z, Kazakov AE, Nguyen M, Kuehn R, Davis RW, Hazen TC, Arkin AP, Deutschbauer A
  48. Adipose-derived stem cells: a review of signaling networks governing cell fate and regenerative potential in the context of craniofacial and long bone skeletal repair.
    Senarath-Yapa K, McArdle A, Renda A, Longaker MT, Quarto N
    Int J Mol Sci
  49. Invasion and proliferation kinetics in enhancing gliomas predict IDH1 mutation status.
    Baldock AL, Yagle K, Born DE, Ahn S, Trister AD, Neal M, Johnston SK, Bridge CA, Basanta D, Scott J, Malone H, Sonabend AM, Canoll P, Mrugala MM, Rockhill JK, Rockne RC, Swanson KR
    Neuro Oncol
  50. Enhanced decolorization of azo dye in a small pilot-scale anaerobic baffled reactor coupled with biocatalyzed electrolysis system (ABR-BES): a design suitable for scaling-up.
    Cui D, Guo YQ, Lee HS, Wu WM, Liang B, Wang AJ, Cheng HY
    Bioresour Technol
  51. Mast cells: potential positive and negative roles in tumor biology.
    Marichal T, Tsai M, Galli SJ
    Cancer Immunol Res
  52. Lumbosacral spine and marrow cavity modeling of acute hematologic toxicity in patients treated with intensity modulated radiation therapy for squamous cell carcinoma of the anal canal.
    Cheng JC, Bazan JG, Wu JK, Koong AC, Chang DT
    Pract Radiat Oncol
  53. The effect of arm position on the dosimetry of thoracic stereotactic ablative radiation therapy using volumetric modulated arc therapy.
    Shultz DB, Jang SS, Hanlon AL, Diehn M, Loo BW, Maxim PG
    Pract Radiat Oncol
  54. Updating emotional content in working memory: a depression-specific deficit?
    Yoon KL, LeMoult J, Joormann J
    J Behav Ther Exp Psychiatry
  55. Α-tubulin K40 acetylation is required for contact inhibition of proliferation and cell-substrate adhesion.
    Aguilar A, Becker L, Tedeschi T, Heller S, Iomini C, Nachury MV
    Mol Biol Cell
  56. Case report of a transfusion-associated hepatitis A infection.
    Hughes JA, Fontaine MJ, Gonzalez CL, Layon AG, Goodnough LT, Galel SA
  57. Executive function is associated with social competence in preschool-aged children born preterm or full term.
    Alduncin N, Huffman LC, Feldman HM, Loe IM
    Early Hum Dev
  58. Cardiac rehabilitation exercise and self-care for chronic heart failure.
    Ades PA, Keteyian SJ, Balady GJ, Houston-Miller N, Kitzman DW, Mancini DM, Rich MW
    JACC Heart Fail
  59. Whole-genome haplotyping using long reads and statistical methods.
    Kuleshov V, Xie D, Chen R, Pushkarev D, Ma Z, Blauwkamp T, Kertesz M, Snyder M
    Nat Biotechnol
  60. Virally mediated optogenetic excitation and inhibition of pain in freely moving nontransgenic mice.
    Iyer SM, Montgomery KL, Towne C, Lee SY, Ramakrishnan C, Deisseroth K, Delp SL
    Nat Biotechnol
  61. Bevacizumab and cyclosphosphamide, doxorubicin, vincristine and prednisone in combination for patients with peripheral T-cell or natural killer cell neoplasms: an Eastern Cooperative Oncology Group study (E2404).
    Ganjoo K, Hong F, Horning SJ, Gascoyne RD, Natkunam Y, Swinnen LJ, Habermann TM, Kahl BS, Advani RH
    Leuk Lymphoma